Karr whole-cell modeling lab

obj_tables Public
Tools for creating and reusing high-quality spreadsheets

KarrLab/obj_tables’s past year of commit activity

Python
8
MIT
2 25 0
Updated Aug 18, 2025
wc_utils Public
Utilities for whole-cell modeling such as logging, plotting, managing git repos, random number generation and others

KarrLab/wc_utils’s past year of commit activity

Python
1
MIT
1 5 0
Updated Aug 18, 2025
KarrLab/test_wc_lang_test_io’s past year of commit activity

0 0
0 0
Updated Aug 18, 2025
KarrLab/test_wc_kb_test_io’s past year of commit activity

0 0
0 0
Updated Aug 18, 2025
wc_kb Public
Tools for building databases of experimental data for constructing whole-cell models

KarrLab/wc_kb’s past year of commit activity

Python
4
MIT
5 12 0
Updated Aug 15, 2025
karr_lab_build_utils Public
Utilities for testing Python code and its downstream dependencies, submitting coverage reports, conducting static analyses, and generating documenation

KarrLab/karr_lab_build_utils’s past year of commit activity

Python 0 MIT 0
2 0
Updated Aug 7, 2025
pkg_utils Public
Utilities for packaging Python code

KarrLab/pkg_utils’s past year of commit activity

Python 0 MIT 0
0 0
Updated Jul 18, 2025
wc_model_gen Public
Framework for systematically and scalably designing whole-cell models from large datasets

KarrLab/wc_model_gen’s past year of commit activity

Python
6
MIT
2 9 0
Updated Jan 20, 2025
wc_sim Public
A multi-algorithmic simulator for whole-cell models

KarrLab/wc_sim’s past year of commit activity

Jupyter Notebook
7
MIT
2 36 0
Updated Jan 15, 2025
KarrLab/datanator_rest_api’s past year of commit activity

Python 0 MIT
3 7 1
Updated Oct 18, 2022