benmaier - Overview

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1. Fast prototyping of infectious-disease models based on reaction equations. Analyze the ODEs analytically or numerically, or run stochastic simulations on networks/well-mixed systems.

   Python 35 2

2. Temporal networks in Python. Provides fast tools to analyze temporal contact networks and simulate dynamic processes on them using Gillespie's SSA.

   C++ 106 7

3. Interactive visualization of networks based on Ulf Aslak's d3 web app.

   Python 302 28

4. command line tool to provide an easy framework to submit computer simulations of arbitrary variety in parameter space to various cluster frameworks

   Python 8 2

5. Distribution of weighted items to bins (either a fixed number of bins or a fixed number of volume per bin). Data may be in form of list, dictionary, list of tuples or csv-file.

   Python 96 16

6. Some Python examples to obtain reaction-diffusion results and animations.

   Jupyter Notebook 97 20