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@collaborativebioinformatics

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  1. Sniphles is a read-based phasing approach for phased variant calling of structural variants.

    Python 12 2

  2. Implement a system to use GNN and/or LLM to use knowledge graphs to integrate literature with knowledge graphs made from large public datasets (CIVIC, TCGA, CPTAC)

    Python 10 2

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Showing 10 of 131 repositories

  • collaborativebioinformatics/MoVana’s past year of commit activity

    WDL

    1

    MIT 0

    0 0

    Updated Jun 20, 2026

  • collaborativebioinformatics/MethSmoothEval’s past year of commit activity

    Jupyter Notebook

    6

    MIT

    1 0 0

    Updated May 30, 2026

  • collaborativebioinformatics/Network_modeling_multimodal_v003’s past year of commit activity

    Python 0 MIT

    1 0 0

    Updated Mar 27, 2026

  • collaborativebioinformatics/Network_modeling_vNF_002’s past year of commit activity

    Python 0 MIT

    1 0 0

    Updated Mar 19, 2026

  • collaborativebioinformatics/OncoLearn’s past year of commit activity

  • collaborativebioinformatics/RAIDers’s past year of commit activity

    Jupyter Notebook

    5

    MIT

    2 0 0

    Updated Mar 13, 2026

  • collaborativebioinformatics/Network_modeling_v002’s past year of commit activity

    Python 0 MIT 0

    0 0

    Updated Mar 11, 2026

  • FedGen Public

    Federated Learning (FL) Infrastructure & Synthetic Data

    collaborativebioinformatics/FedGen’s past year of commit activity

    Python

    7

    MIT

    3 5 1

    Updated Jan 23, 2026

  • collaborativebioinformatics/Haploblock_Clusters_ElixirBH25’s past year of commit activity

    Python

    6

    MIT

    2 0 0

    Updated Jan 15, 2026

  • omnigenome Public

    Pangenome & Genomic Cluster Modeling

    collaborativebioinformatics/omnigenome’s past year of commit activity

    Jupyter Notebook

    5

    MIT

    1 0 0

    Updated Jan 13, 2026

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