Li Ding's Lab

@ding-lab

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microsatellite instability detection using tumor only or paired tumor-normal data

C++ 133 55
Characterization of Germline variants

Python 101 37
identifying mutational significance in cancer genomes

Perl 62 20
3D hotspot mutation proximity analysis tool

Perl 53 26

Showing 10 of 147 repositories

ding-lab/G4X_viewer’s past year of commit activity

Dockerfile 0 0
0 0
Updated Jun 9, 2026
ding-lab/OncoGrad’s past year of commit activity

Jupyter Notebook 0 0
0 0
Updated Jun 1, 2026
ding-lab/germlinewrapper’s past year of commit activity

Perl
4
GPL-3.0
4 0 0
Updated May 6, 2026
ding-lab/mCRC_publication’s past year of commit activity

R
1
0
0 0
Updated May 4, 2026
somaticwrapper Public
Detect somatic variants from tumor and normal WGS/WXS data

ding-lab/somaticwrapper’s past year of commit activity

Perl
20
AGPL-3.0
9 1 0
Updated Apr 24, 2026
importGDC Public
Automated download of CPTAC3 data from GDC

ding-lab/importGDC’s past year of commit activity

Shell
2
0
0 0
Updated Apr 8, 2026
GDC.case.discover Public
Obtain submitted reads and clinical info associated with CPTAC3 cases

ding-lab/GDC.case.discover’s past year of commit activity

Shell
1
GPL-3.0
2 0 0
Updated Mar 25, 2026
FSAudit Public
Filesystem audit visualization

ding-lab/FSAudit’s past year of commit activity

Shell
1
0
0 0
Updated Feb 23, 2026
SRescue Public
Pipeline for SR-LR integration

ding-lab/SRescue’s past year of commit activity

Nextflow 0 GPL-3.0 0
0 0
Updated Feb 17, 2026
SVLover Public
LOng read Variant ExploreR

ding-lab/SVLover’s past year of commit activity

Nextflow 0 GPL-3.0 0
0 0
Updated Feb 17, 2026

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