◐ Shell
clean mode source ↗

OpenWorm

OpenWorm

An open-source project dedicated to creating a virtual C. elegans nematode in a computer.

An overview of the core repositories in the project, along with the current status of automated testing, can be found here.

Pinned Loading

  1. Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

    Python 3k 239

  2. OpenWorm main website

    HTML 29 35

  3. Geppetto is an open-source platform to build web-based applications to visualize and simulate neuroscience data and models.

    Python 217 50

  4. The c302 framework for generating multiscale network models of C. elegans

    Python 145 37

  5. Tools and curated datasets to build quantitative models of C. elegans ion channels

    Jupyter Notebook 11 4

Repositories

Showing 10 of 111 repositories

  • sibernetic Public

    This is a C++/OpenCL implementation of the PCISPH algorithm supplemented with a set of biomechanics related features applied to C. elegans locomotion

    openworm/sibernetic’s past year of commit activity

  • openworm/CE_locomotion’s past year of commit activity

    C++

    4 5 7 2

    Updated Jun 12, 2026

  • openworm/CelegansProteinExtractionPipeline’s past year of commit activity

    Jupyter Notebook 0

    2 0 0

    Updated Jun 12, 2026

  • ConnectomeToolbox Public

    Information on published connectomics data related to C. elegans

    openworm/ConnectomeToolbox’s past year of commit activity

    Python

    7

    MIT

    7 3 0

    Updated Jun 11, 2026

  • OpenWorm Public

    Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

    openworm/OpenWorm’s past year of commit activity

  • Worm3DViewer Public

    Test repository for multiple views of the worm in 3D

    openworm/Worm3DViewer’s past year of commit activity

    Python 0 0

    0 1

    Updated Jun 8, 2026

  • WCONViewer Public

    Python based viewer for WCON files in 2D

    openworm/WCONViewer’s past year of commit activity

    Python 0 MIT 0

    0 0

    Updated Jun 5, 2026

  • openworm_docs Public

    Documentation for OpenWorm, i.e. docs.openworm.org

    openworm/openworm_docs’s past year of commit activity

    Python

    44 26 13 1

    Updated May 27, 2026

  • openworm/org.geppetto.datasources’s past year of commit activity

    Java

    2 2 0 5

    Updated May 26, 2026

  • c302 Public

    The c302 framework for generating multiscale network models of C. elegans

    openworm/c302’s past year of commit activity